In order to test the hypothesis that bacterial membrane protein is mor
e slowly degraded than soluble protein in seawater, we examined degrad
ation by natural bacterioplankton of membrane and soluble proteins pre
pared from the marine bacterium Vibrio alginolyticus radiolabeled with
H-3- or C-14-leucine. First order kinetic constants indicated that pr
oteins in crude membrane extract are degraded at significantly slower
rates (1/2 to 1/6) than the soluble proteins. Proteins determined to b
e intimately associated with the membrane were not degraded during the
initial 45 hi while a substantial fraction of soluble proteins was de
graded during the same period. The data are consistent with a model in
which membrane and cell wall materials severely restrict access of ba
cterial proteases to membrane proteins. After prolonged incubation, ho
wever, membrane proteins started to be degraded, suggesting that prote
ins protected by membrane components were made available for degradati
on after ectoenzymatic destruction of membrane components. Our data su
pport the hypothesis that macromolecular organic complexes play a role
in temporary storage of dissolved organic matter (DOM) in seawater an
d that complementary hydrolysis by different ectoenzymes produced by d
iverse bacterioplankton is important in determining rates and patterns
of DOM degradation in the sea.