Extensive polymorphism of key parasite antigens is likely to hamper th
e effectiveness of subunit vaccines against Plasmodium falciparum infe
ction. However, little is known about the extent of the antigenic repe
rtoire of naturally circulating strains in different areas where malar
ia is endemic. To address this question,,ve conducted a study in which
blood samples were collected from parasitemic individuals living with
in a small hamlet in Western Irian Jaya and Subjected to PCR amplifica
tion using primers that would allow amplification of the gene encoding
merozoite surface protein-2 (MSP2). We determined the nucleotide sequ
ence of the amplified product and compared the deduced amino acid sequ
ences to sequences obtained from samples collected in the same hamlet
29 months previously. MSP2 genes belonging to both major allelic famil
ies were observed at both time points. In the Case of the FC27 MSP2 fa
mily, we observed that the majority of individuals were infected by pa
rasites expressing the same form of MSP2. Infections with parasites ex
pressing 3D7 MSP2 family alleles were more heterogeneous. No MSP2 alle
les observed at the earlier time point were detectable at the later ti
me point, either for the population as a whole or for individuals who
were assayed at both time points. We examined a subset of the infected
patients by using blood samples taken between the two major surveys.
In no patients could we detect reinfection by a parasite expressing a
previously encountered form of MSP2. Our results are consistent with t
he possibility that infection induces a form of strain-specific immune
response against the MSP2 antigen that biases against reinfection by
parasites bearing identical forms of MSP2.