C. Aleman et J. Puiggali, CONFORMATIONAL PREFERENCES OF THE ASPARAGINE RESIDUE - GAS-PHASE, AQUEOUS-SOLUTION, AND CHLOROFORM SOLUTION CALCULATIONS ON THE MODEL DIPEPTIDE, JOURNAL OF PHYSICAL CHEMISTRY B, 101(17), 1997, pp. 3441-3446
The conformational preferences of the asparagine dipeptide have been d
etermined in the gas phase using ab initio calculations at the HF/6-31
G(d) and MP2/6-31G(d)levels. Geometry optimizations lead to 17 differe
nt minima, the lowest energy structure being characterized by a C-7,C-
eq backbone orientation and a gauche conformation for the side chain.
Self-consistent reaction-field (SCRF) calculations using a polarized c
ontinuum method have been performed in order to evaluate the effects o
f the solvent on the conformational preferences of the compound under
study. Water and chloroform were the solvents chosen for this purpose.
Results show that water solvent exerts a larger influence on the conf
ormational properties of the asparagine dipeptide than chloroform solv
ent. However, in both solvents the lowest energy structure is the same
as that in the gas phase. Finally, the side chain conformations of th
e characterized minima have been analyzed and compared with experiment
al data. The gauche was the most populated conformer in the three inve
stigated environments. This feature is in excellent agreement with the
experimental data reported for peptides and proteins.