Several families of transposable elements (TEs), most of them belongin
g to the retrotransposon category, are particularly enriched in Drosop
hila melanogaster constitutive heterochromatin. The enrichment of TE-h
omologous sequences into heterochromatin is not a peculiar feature of
the Drosophila genome, but appears to be widespread among higher eukar
yotes. The constitutive heterochromatin of D. melanogaster contains se
veral genetically active domains; this raises the possibility that TE-
homologous sequences inserted into functional heterochromatin compartm
ents may be expressed. In this review I present available data on the
genetic and molecular organization of D. melanogaster constitutive het
erochromatin and its relationship with transposable elements. The impl
ications of these findings on the possible impact of heterochromatic T
Es on the function and evolution of the host genome are also discussed
.