Vv. Tolstikov et al., SYNTHESIS AND DNA DUPLEX STABILITIES OF OLIGONUCLEOTIDES CONTAINING C-5-(3-METHOXYPROPYNYL)-2'-DEOXYURIDINE RESIDUES, Nucleosides & nucleotides, 16(3), 1997, pp. 215-225
ethoxytrityl-5-(3-methoxypropynyl)-2'-deoxyuridine phosphoroamidite wa
s synthesized with the use of commercial 3-methoxypropyne. Oligonucleo
tides (ODNs) containing 5-(3-methoxypropynyl)-2'-deoxyuridine in diffe
rent positions were prepared. The stabilities of the duplexes formed b
y these ODNs with the complementary templates are increased in compari
son with the unmodified counterparts. On average modified residue inco
rporated, the Tm is raised by 1 degrees C.