CHARACTERIZATION OF AN AFRICAN SWINE FEVER VIRUS 20-KDA DNA-POLYMERASE INVOLVED IN DNA-REPAIR

Citation
M. Oliveros et al., CHARACTERIZATION OF AN AFRICAN SWINE FEVER VIRUS 20-KDA DNA-POLYMERASE INVOLVED IN DNA-REPAIR, The Journal of biological chemistry, 272(49), 1997, pp. 30899-30910
Citations number
79
ISSN journal
00219258
Volume
272
Issue
49
Year of publication
1997
Pages
30899 - 30910
Database
ISI
SICI code
0021-9258(1997)272:49<30899:COAASF>2.0.ZU;2-Y
Abstract
African swine fever virus (ASFV) encodes a novel DNA polymerase, const ituted of only 174 amino acids, belonging to the polymerase (pol) X fa mily of DNA polymerases. Biochemical analyses of the purified enzyme i ndicate that ASFV pol X is a monomeric DNA-directed DNA polymerase, hi ghly distributive, lacking a proofreading 3'-5'-exonuclease, and with a poor discrimination against dideoxynucleotides. A multiple alignment of family X DNA polymerases, together with the extrapolation to the c rystal structure of mammalian DNA polymerase beta (pol beta), showed t he conservation in ASFV pol X of the most critical residues involved i n DNA binding, nucleotide binding, and catalysis of the polymerization reaction. Therefore, the 20-kDa ASFV pol X most likely represents the minimal functional version of an evolutionarily conserved pol beta-ty pe DNA polymerase core, constituted by only the ''palm'' and ''thumb'' subdomains. It is worth noting that such an ''unfingered'' DNA polyme rase is able to handle templated DNA polymerization with a considerabl e high fidelity at the base discrimination level. Base excision repair is considered to be a cellular defense mechanism repairing modified b ases in DNA. Interestingly, the fact that ASFV pol X is able to conduc t filling of a single nucleotide gap points to a putative role in base excision repair during the ASFV life cycle.