We studied an effect of elevated atmospheric CO2 on rhizosphere microo
rganisms in a hydroponics system where young wheat plants provided the
only source of C for microorganisms. Plants were cultivated in minera
l solution in sterile silica sand and exposed to control (ambient) and
elevated (double) CO2 concentrations for periods of 13, 20, 25 and 34
days. Microbial biomass C (C content in fraction of size 0.3-2.7 mu m
) was not affected by the elevated CO2 concentration during the first
25 days of plant growth and was increased after 34 days of plant growt
h. A content of poly-beta-hydroxybutyrate (PHB) reserve compounds (mea
sured as derivatized product of 3-hydroxy-butyric acid and -tert-butyl
dimethylsilyl-N-methyltrifluoracetamide using GC-MS) was lowered signi
ficantly (p<0.001) in the elevated CO2 after 25 and 34 days. It was ac
companied with a shift of bacterial distribution towards the nutrition
al groups utilising more complex organic material (number of CFUs on m
edia with different sources of C and N). A coincidence of several even
ts connected with plant and microbial carbon economy (decrease of an a
ssimilation rate and relative growth rate of plants, small increase of
microbial biomass, PHB decrease and suppression within the bacterial
nutritional group requiring the most readily available source of C and
energy) was observed in the system under elevated CO2 on the 25th day
. A modification of the CC-MS method for the detection of low levels o
f PHB compounds in natural samples was developed. We excluded the lipi
ds fractionation step and we used EI MS/MS detection of the main fragm
ent ions of the derivatized compound. This guarantees that the ion pro
files have high signal-to-noise ratio at correct retention time. The d
etection limit is then about 30 pg g(-1) of sand or soil. The rhizosph
ere microflora responded very sensitively to the short-term changes in
C partitioning in plants caused by the elevated CO2.