SEQUENCE AND ORGANIZATION OF THE LEFT MULTIGENE FAMILY-110 REGION OF THE VERO-ADAPTED L60V STRAIN OF AFRICAN SWINE FEVER VIRUS

Citation
S. Pires et al., SEQUENCE AND ORGANIZATION OF THE LEFT MULTIGENE FAMILY-110 REGION OF THE VERO-ADAPTED L60V STRAIN OF AFRICAN SWINE FEVER VIRUS, Virus genes, 15(3), 1997, pp. 271-274
Citations number
19
Categorie Soggetti
Genetics & Heredity",Virology
Journal title
ISSN journal
09208569
Volume
15
Issue
3
Year of publication
1997
Pages
271 - 274
Database
ISI
SICI code
0920-8569(1997)15:3<271:SAOOTL>2.0.ZU;2-B
Abstract
Sequencing of the left variable region of the L60V Vero cell-adapted s train of African swine fever virus (ASFV) showed the presence of three genes belonging to multigene family 110 (MGF110) and of a fourth unre lated gene. This gene was separated from the MGF110 genes by a region rich in direct repeats. The first MGF110 gene, V1L, with 104 codons, w as only moderately related to the other two, W1L and W2L, with 124 and 80 codons, respectively. These two genes were closely related, W2L be ing a truncated duplication of W1L. Homology matrix analysis of the se quence against itself showed the existence of a repeated block corresp onding to the central conserved domain of the three genes, flanked by two other repeated blocks in W1L and W2L. The comparison of the organi zation of the left variable region of ASFV L60V with that of field iso lates and other adapted viruses revealed that adaptation of unrelated viruses resulted in similar large deletions that map, in their right b oundaries, exactly at the same positions in the intergenic repeat-rich region.