H. Claus et al., A DATABASE SYSTEM FOR FRAGMENT PATTERNS OF GENOMIC DNA OF STAPHYLOCOCCUS-AUREUS, Zentralblatt fur Bakteriologie, 287(1-2), 1998, pp. 105-116
The increasing use of molecular fingerprints in the epidemiology of ba
cterial nosocomial infections urgently demands a computerised analysis
and storage of corresponding patterns, especially with regard to resu
lts obtained at different times and in different laboratories. This pa
per presents a database system in connection with cluster analysis of
clonal relations by using genomic DNA fragment patterns of S. aureus (
SmaI-digestion, pulsed-field gel electrophoresis) as an example: The d
atabase is operated under MS-Access, version 2.0. The cluster analysis
is based on an optimising similarity algorithm.