Numerical simulations have been carried out to study and compare the m
echanisms of the formations of the topside and bottomside ionospheric
irregularities. As is well-known, the topside ionospheric irregulariti
es have always originated from the bottomside ionosphere due to Gravit
ational Rayleigh-Taylor (GRT) instability. From the penetration proces
s we found that the primary bubble with a horizontal scale of tens of
kilometers always has a smooth shape in the bottomside ionosphere and
breaks into much smaller-scale structures after penetrating into deep
topside ionosphere. Since the plasma bubble is unlikely to break into
irregularities in the bottomside ionosphere, the bottomside irregulari
ties probably result from the turbulence in the neutral atmosphere. Ex
amples of simulations are presented to demonstrate that bottomside irr
egularities may exist in a region with a strong neutral wind jet and s
eeding gravity wave motion. A strong neutral jet stream always has a s
trong vertical wind shear, which provides a broad height range of dyna
mic instability. When the atmospheric gravity wave approaches its crit
ical level, its amplitude will continually grow to break into smaller-
scale waves and turbulence. Then all the waves of different scales as
well as the turbulence will become the seeds of the bottomside irregul
arities.