COMPLEX ORIGIN OF THE HLA-DR10 HAPLOTYPE

Citation
R. Gongora et al., COMPLEX ORIGIN OF THE HLA-DR10 HAPLOTYPE, The Journal of immunology, 159(12), 1997, pp. 6044-6051
Citations number
37
Journal title
ISSN journal
00221767
Volume
159
Issue
12
Year of publication
1997
Pages
6044 - 6051
Database
ISI
SICI code
0022-1767(1997)159:12<6044:COOTHH>2.0.ZU;2-3
Abstract
The region of the HLA complex occupied by the DRB genes has undergone many rearrangements in the course of primate evolution. The rearrangem ents have produced a number of haplotypes differing from one another i n the number and composition of the DRB genes. Some of the rearrangeme nts also affected the DRB genes themselves. Selective intron sequencin g has revealed the DR10 haplotype to be composed of at least three seg ments, each of different origin. The haplotype carries three DRB genes (gene fragments): DRBI10, DRB6, and DRB9. The 5' end of the DRB1*10 gene, from the promoter region to a site in intron 1 approximately 500 bp from the beginning of exon 2, is derived from a DRB103-like gene. The segment of the DR10 haplotype encompassing the rest of the DRB11 0 gene and extending to the region between the DRB1 and DRB6 genes is of independent origin; it diverged from other DRB genes (DRB101 and D RB103) approximately 30 million years ago. Finally, the third segment encompassing the remainder of the DR10 haplotype is derived from a DR 1-like haplotype. Since the functional part of the DR10 haplotype is o f independent origin, there is little justification for the currently common practice of placing the haplotype together with DR1 in the grou p of DR1 haplotypes. The rearrangements in the DR haplotypes may const itute one of several mechanisms for increasing diversity at the DRB lo ci. The region of high instability seems to be flanked by conservative ly evolving regions.