The Ly-6 Ag family consists of glycosyl-phosphatidylinositol-anchored
surface proteins with a molecular mass of about 15 kDa. Seven members
of the murine family have been characterized, and from five of these t
he genes have been cloned. Three members of the human family have been
characterized: CD54, Ag E48, and the RIG-E or TSA-1/Sca-2 Ag. Most of
the genes are expressed on lymphocytes, but some are expressed on oth
er tissues as well. The mapped genes of the murine Ly-6 Ags, as well a
s of CD59, were shown to have a highly conserved structure, each consi
sting of four exons. The human E48 Ag was originally identified as a t
arget Ag for radioimmunotherapy of patients with squamous cell carcino
ma. The Ag is expressed on keratinocytes, but evidently not on lymphoc
ytes. Molecular cloning of the cDNA encoding the Ag revealed that this
Ag is most likely the human homologue of the murine Ly-6 Ag, ThB. In
this paper, we describe that, in contrast to all other Ly-6 genes, the
gene encoding the human E48 Ag consists of only three exons. Sequence
s at the 5' end of the transcription start site were shown to drive ke
ratinocyte-associated expression. These data suggest that the function
al elimination of an ancestral Ly-6 exon 1 switched the expression fro
m lymphocytes toward keratinocytes.