Eukaryotic messenger RNA (mRNA) synthesis is a complex multi-stage pro
cess that requires the concerted action of many cellular factors to ge
nerate a mature functional message. This elaborate process by RNA poly
merase II (pol II) proceeds via multiple stages-preinitiation, initiat
ion (Figure 1), promoter clearance, elongation (Figure 1) and terminat
ion - which have come to be referred to collectively as the transcript
ion cycle, Although the preinitiation and initiation stages of transcr
iption have received the most attention during the past decade, the pa
st few years have been a watershed for biochemical studies of the pol
II elongation complex, Recent studies have demonstrated the existence
of several families of pol II elongation factors and nuclear proteins
that can govern the activity of pol II during mRNA chain elongation. N
ew findings have revealed that the elongation stage of transcription i
s a critical site for the regulation of gene expression. Evidence obta
ined to date suggests that eukaryotes regulate elongation by both 'gen
eral' and 'activator dependent' mechanisms, These mechanisms necessita
te alteration of pol II's catalytic site, modification of chromatin st
ructure, phosphorylation of the pol II carboxyl-terminal domain (CTD)
and involvement of other components of the transcription machinery to
increase the rate and efficiency of transcription elongation. This min
ireview is an annotation on the recent progress in studies of the bioc
hemical mechanism and molecular regulation of the elongation stages of
eukaryotic mRNA synthesis. The recent developments that have guided o
ur understanding and propelled current research on transcription elong
ation by mammalian pol II will be described here.