ISOSTAR - A LIBRARY OF INFORMATION ABOUT NONBONDED INTERACTIONS

Citation
Ij. Bruno et al., ISOSTAR - A LIBRARY OF INFORMATION ABOUT NONBONDED INTERACTIONS, Journal of computer-aided molecular design, 11(6), 1997, pp. 525-537
Citations number
71
ISSN journal
0920654X
Volume
11
Issue
6
Year of publication
1997
Pages
525 - 537
Database
ISI
SICI code
0920-654X(1997)11:6<525:I-ALOI>2.0.ZU;2-E
Abstract
Crystallographic and theoretical tab initio) data on intermolecular no nbonded interactions have been gathered together in a computerised lib rary ('IsoStar'). The library contains information about the nonbonded contacts formed by some 250 chemical groupings. The data can be displ ayed visually-and used to aid protein-ligand docking or the identifica tion of bioisosteric 'replacements. Data from the library show that th ere is great variability in the geometrical preferences of different t ypes of hydrogen bonds, although in general there is a tendency for H- bonds to form along lone-pair directions. The H-bond acceptor abilitie s of oxygen and sulphur atoms are highly dependent on intramolecular e nvironments. The nonbonded contacts formed by many hydrophobic groups show surprisingly strong directional preferences. Many unusual nonbond ed interactions are to be found in the library-and are of potential va lue for designing novel biologically active molecules.