Since the inception of recombinant DNA technology, different strategie
s have been developed in the isolation, renaturation, and native disul
fide bond formation of proteins produced as insoluble inclusion bodies
in Escherichia coli. One of the major challenges in optimizing renatu
ration processes is to prevent the formation of off-pathway inactive a
nd aggregated species. On the basis of a simplified kinetic model desc
ribing the competition between folding and aggregation, it was possibl
e to analyze the effects of denaturant and thiol/disulfide concentrati
ons on this competition. Although higher guanidinium chloride (GdmCl)
concentrations resulted in higher renaturation yields, the folding rat
e was negatively affected, indicating an optimum range of GdmCl for op
timum renaturation rates and yields. Similarly, higher total glutathio
ne concentrations resulted in higher yields but decreased rates, also
indicating an optimum total glutathione concentration for optimum rena
turation rates and yields (6-16 mM), with an optimum ratio of reduced
to oxidized glutathione between 1 and 3. To characterize the nature of
aggregates, aggregation experiments were performed under different ox
idizing/reducing conditions. It is shown that hydrophobic interactions
between partially folded polypeptide chains are the major cause of ag
gregation. Aggregation is fast and aggregate concentration does not si
gnificantly increase beyond the first minute of renaturation. Under co
nditions which promote disulfide bonding, aggregate size, but not conc
entration, may increase due to disulfide bond formation, resulting in
covalently bonded aggregates.