Two monoclonal antibodies (McAb2C9, McAb1E5) against Staphylococcal nu
clease R (SNase R) and its N-terminal peptide fragments were prepared,
purified and characterized. Further studies show that the intact enzy
me SNase R and its seven N-terminal peptide fragments:differ in their
interaction with McAb2C9. SNase R, SNR121, SNR102, SNR79 and SNR52 can
bind to McAb2C9 readily, while fragments of SNR141, SNR135, SNR110 re
act with the antibody poorly. If this difference is due to diverse ext
ent of exposure of the specific epitope in the fragments, it is sugges
ted that the conformation of the peptide is subjected to continuous ad
justments through chain elongation until the biologically active prote
in is formed. This result supports Tsou's hypothesis of nascent peptid
e folding experimentally.