H. Li et al., EFFECT OF PRESSURE ON INDIVIDUAL HYDROGEN-BONDS IN PROTEINS, BASIC PANCREATIC TRYPSIN-INHIBITOR, Biochemistry, 37(5), 1998, pp. 1167-1173
By performing two-dimensional H-1 NMR measurements at 750 MHz at varyi
ng hydrostatic pressure (1-2000 bar) in an aqueous environment (90% (H
2O)-H-1/10% (H2O)-H-2), We found that the signals of the peptide NH pr
otons of basic pancreatic trypsin inhibitor (BPTI) in the folded state
shift their positions linearly and reversibly with pressure. The stro
ng tendency for low-field shifts of these protons indicates that most
of the amide groups form hydrogen bonds either with carbonyls or with
water and that these hydrogen bends are shortened by pressure. The NH
protons interacting favorably with solvent water tend to exhibit large
r pressure-induced shifts than others, showing that the shift can be u
sed as a diagnostic probe for the hydrogen bonding state of an NH grou
p with water. Furthermore, we estimated shortening of individual H ...
O distances of the NH ... O=C hydrogen bonds at 2000 bar on the basis
of the empirical shift-distance correlation for BPTI. The estimated s
hortened distances varied considerably from site to site in the range
of 0-0.11 Angstrom, larger in the turn but smaller in the interiors of
secondary structures. These variations suggest that the volume fluctu
ation is heterogeneous within BPTI and that high-pressure NMR at high
field can offer a unique opportunity for detecting microscopic structu
ral fluctuation in proteins.