EFFECT OF PRESSURE ON INDIVIDUAL HYDROGEN-BONDS IN PROTEINS, BASIC PANCREATIC TRYPSIN-INHIBITOR

Citation
H. Li et al., EFFECT OF PRESSURE ON INDIVIDUAL HYDROGEN-BONDS IN PROTEINS, BASIC PANCREATIC TRYPSIN-INHIBITOR, Biochemistry, 37(5), 1998, pp. 1167-1173
Citations number
42
Categorie Soggetti
Biology
Journal title
ISSN journal
00062960
Volume
37
Issue
5
Year of publication
1998
Pages
1167 - 1173
Database
ISI
SICI code
0006-2960(1998)37:5<1167:EOPOIH>2.0.ZU;2-P
Abstract
By performing two-dimensional H-1 NMR measurements at 750 MHz at varyi ng hydrostatic pressure (1-2000 bar) in an aqueous environment (90% (H 2O)-H-1/10% (H2O)-H-2), We found that the signals of the peptide NH pr otons of basic pancreatic trypsin inhibitor (BPTI) in the folded state shift their positions linearly and reversibly with pressure. The stro ng tendency for low-field shifts of these protons indicates that most of the amide groups form hydrogen bonds either with carbonyls or with water and that these hydrogen bends are shortened by pressure. The NH protons interacting favorably with solvent water tend to exhibit large r pressure-induced shifts than others, showing that the shift can be u sed as a diagnostic probe for the hydrogen bonding state of an NH grou p with water. Furthermore, we estimated shortening of individual H ... O distances of the NH ... O=C hydrogen bonds at 2000 bar on the basis of the empirical shift-distance correlation for BPTI. The estimated s hortened distances varied considerably from site to site in the range of 0-0.11 Angstrom, larger in the turn but smaller in the interiors of secondary structures. These variations suggest that the volume fluctu ation is heterogeneous within BPTI and that high-pressure NMR at high field can offer a unique opportunity for detecting microscopic structu ral fluctuation in proteins.