There is controversy regarding the relationship of structural or bioch
emical brainstem lesions to ''idiopathic'' narcolepsy. Most cases of t
he narcoleptic syndrome are considered to be idiopathic because no str
uctural lesion is detectable, although some cases of secondary narcole
psy are known to be associated with no structural brainstem lesions. U
sing proton spectroscopy, we determined levels of ventral pontine meta
bolite pools in 12 normal subjects and 12 subjects with idiopathic nar
colepsy. REM sleep is generated in ventral pontine areas. Proton spect
roscopy was used to study levels of N-acetyl aspartate (NAA) as a mark
er of cell mass, creatine and phosphocreatine (Cr + PCr), and choline
(Cho). The intensity of the peaks, as determined by the area under the
peak (AUP), was measured. The AUP correlates with the quantity of che
mical present. In this study, the ratios of NAA to Cr + PCr were simil
ar in normal subjects and in narcoleptic subjects with idiopathic narc
olepsy. No differences in measured metabolic ratio were observed in su
bjects who slept during the scan procedure compared with those who rem
ained awake. Subjects with ''symptomatic'' narcolepsy accompanied by a
n obvious structural brain lesion were not studied. Proton spectroscop
y of the brain initiates a new kind of neurochemistry, allowing the no
ninvasive study of metabolic pools in the living human brain without t
he use of any kind of tracer or radioactive molecule. In this study, t
here was no evidence of cell loss in the ventral pontine areas of subj
ects with the narcoleptic syndrome.