The long-standing conclusion that the Cdc7 kinase of Saccharomyces cer
evisiae is required only to trigger S phase has been challenged by rec
ent data that suggests it acts directly on individual replication orig
ins. We tested the possibility that early-and late-activated origins h
ave different requirements for Cdc7 activity. Cells carrying a cdc7(ts
) allele were first arrested in G(1) at the cdc7 block by incubation a
t 37 degrees C, and then were allowed to enter S phase by brief incuba
tion at 23 degrees C. During the S phase, after return to 37 degrees C
, early-firing replication origins were activated, but late origins fa
iled to fire. Similarly, a plasmid with a late-activated origin was de
fective in replication. As a consequence of the origin activation defe
ct, duplication of chromosomal sequences that are normally replicated
from late origins was greatly delayed. Early-replicating regions of th
e genome duplicated at approximately their normal time. The requiremen
ts of early and late origins for Cdc7 appear to be temporally rather t
han quantitatively different, as reducing overall levels of Cdc7 by gr
owth at semi-permissive temperature reduced activation at early and la
te origins approximately equally. Our results show that Cdc7 activates
early and late origins separately, with late origins requiring the ac
tivity later in S phase to permit replication initiation.