In vitro tract tracing allowing for continuous observation of the perf
orant path is a crucial prerequisite for experimental studies on the e
ntorhinal-hippocampal interaction in an organotypic slice culture cont
aining the entorhinal cortex, the perforant path, and the dentate gyru
s (OEHSC). We prepared horizontal slices of the temporal entorhinal-hi
ppocampal region of the rat on a vibratome, and the perforant path axo
ns were traced by application of the fluorescent tracer Mini Ruby on t
he entorhinal cortex. After 2 days in vitro (div), the perforant path
became visible in most cultures. Entorhinal neurons and single perfora
nt fibers could be followed to the outer molecular layers of the denta
te gyrus by in vitro fluorescence microscopy and it was possible to mo
nitor the perforant path directly over a period of 25 div. Moreover, u
ltrastructural analysis proved the existence of traced perforant path
boutons forming synapses with spines and dendritic shafts in the outer
molecular layers of the dentate gyrus. Transsection of the prelabelle
d perforant path in vitro resulted in anterograde degeneration and sub
sequent phagocytosis of axonal material by activated microglial cells
in the zone of denervation. In conclusion, in vitro tracing demonstrat
es the maintenance of the entorhinal-hippocampal pathway in OEHSCs and
permits monitoring of dynamic changes in the prelabeled perforant pat
h after various lesion paradigms, e.g., transsection or neurotoxin tre
atment. This approach permits further studies on the efficacy of neuro
protectants, cytokines, and growth factors in the treatment of lesion-
induced neuronal degeneration. (C) 1998 Wiley-Liss, Inc.