Tripler-forming oligonucleotides (TFOs) have been shown to inhibit bot
h transcription in vitro and the expression of target genes in cell cu
lture by binding to polypurine/polypyrimidine sequences in several hum
an gene promoters. The c-myc protooncogene Is overexpressed in a varie
ty of human cancers and appears to play an important role in;he prolif
eration of these cells. In an attempt to assay the ability of tripler-
forming oligonucleotides to inhibit expression of-a target gene in viv
o, we have developed a cellular system involving transfection of a c-m
yc promoter-driven luciferase reporter plasmid with triplex forming ol
igonucleotides targeted to the human c-myc protooncogene. To increase
the stability of the TFO, we have used modified phosphorothioate oligo
nucleotides. Tripler formation with a modified phosphorothioate oligon
ucleotide occurs with approximately equal binding affinity as that see
n using a phosphodiester oligonucleotide. Phosphorothioate-modified TF
Os targeted to c-myc? inhibit transcription of the c-myc promoter in H
eLa cells as demonstrated by a decrease in luciferase expression from
a luciferase reporter gene construct, These results suggests that trip
ler formation may represent a gene-specific means of inhibiting specif
ic protooncogene expression.