M. Cerbah et al., MOLECULAR PHYLOGENY OF THE GENUS HYPOCHAERIS USING INTERNAL TRANSCRIBED SPACERS OF NUCLEAR RDNA - INFERENCE FOR CHROMOSOMAL EVOLUTION, Molecular biology and evolution, 15(3), 1998, pp. 345-354
Sequences of the internal transcribed spacers (ITSs) of 18S-26S nuclea
r ribosomal DNA were used to resolve phylogenetic relationships and ch
romosomal evolution among 14 species of the genus Hypochaeris (Asterac
eae). Parsimony analysis was performed for phylogenetic reconstruction
, and sequence divergence between species was estimated. Pairwise sequ
ence divergence within Hypochaeris genus ranged from 0% to 25.68% in I
TS1 and from 0% to 17.08% in ITS2. A highly resolved strict-consensus
tree was obtained that showed the phylogenetically useful information
of ITS sequences within the genus Hypochaeris. Four clades could be we
ll distinguished, one of them formed by the single species H. robertia
, which appeared to be the most related to the ancestral species of th
e genus. The results agree with taxonomic classification based on morp
hological data, and the tree obtained, when indels are coded as missin
g data, aggregates the species having the same chromosome number, exce
pt in one clade. According to the ITS phylogenetic tree, the chromosom
al evolution within the genus Hypochaeris conflicts with the previous
hypothesis and suggests that karyotype evolution in Hypochaeris was ac
companied with both decreasing and increasing dysploidy, probably with
several chromosomal rearrangments, and from an ancestral basic chromo
some number of 4 or 5.