SUBSTRATE-SPECIFICITY OF THE OGG1 PROTEIN OF SACCHAROMYCES-CEREVISIAE- EXCISION OF GUANINE LESIONS PRODUCED IN DNA BY IONIZING-RADIATION OR HYDROGEN-PEROXIDE METAL-ION GENERATED FREE-RADICALS
B. Karahalil et al., SUBSTRATE-SPECIFICITY OF THE OGG1 PROTEIN OF SACCHAROMYCES-CEREVISIAE- EXCISION OF GUANINE LESIONS PRODUCED IN DNA BY IONIZING-RADIATION OR HYDROGEN-PEROXIDE METAL-ION GENERATED FREE-RADICALS, Nucleic acids research, 26(5), 1998, pp. 1228-1232
We have investigated the substrate specificity of the Ogg1 protein of
Saccharomyces cerevisiae (yOgg1 protein) for excision of modified DNA
bases from oxidatively damaged DNA substrates using gas chromatography
/isotope dilution mass spectrometry, Four DNA substrates prepared by t
reatment with H2O2/Fe(III)-EDTA/ascorbic acid, H2O2/Cu(II) and gamma-i
rradiation under N2O or air were used, The results showed that 8-hydro
xyguanine (8-OH-Gua) and 2,6-diamino-4-hydroxy-5-formamidopyrimid (Fap
y-Gua) were efficiently excised from DNA exposed to ionizing radiation
in the presence of N2O or air, On the other hand, 8-OH-Gua and FapyGu
a were not excised from H2O2/Fe(III)-EDTA/ascorbic acid-treated and H2
O2/Cu(II)-treated DNA respectively, Fourteen other lesions, including
the adenine lesions 8-hydroxyadenine and 4,6-diamino-5-formamidopyrimi
dine, were not excised from any of the DNA substrates. Kinetics of exc
ision significantly depended on the nature of the damaged DNA substrat
es. The findings suggest that, in addition to 8-OH-Gua, FapyGua may al
so be a primary substrate of yOgg1 in cells, The results also show sig
nificant differences between the substrate specificities of yOgg1 prot
ein and its functional analog Fpg protein in Escherichia coli.