TRANSCRIPT ANALYSIS OF THE TOBACCO PLASTID OPERON RPS2 ATPI/H/F/A REVEALS THE EXISTENCE OF A NONCONSENSUS TYPE-II (NCII) PROMOTER UPSTREAM OF THE ATPI CODING SEQUENCE/
T. Miyagi et al., TRANSCRIPT ANALYSIS OF THE TOBACCO PLASTID OPERON RPS2 ATPI/H/F/A REVEALS THE EXISTENCE OF A NONCONSENSUS TYPE-II (NCII) PROMOTER UPSTREAM OF THE ATPI CODING SEQUENCE/, MGG. Molecular & general genetics, 257(3), 1998, pp. 299-307
The plastid ATP synthase complex is composed of nine subunits, of whic
h six are encoded in the plastome. The plastid-encoded genes are arran
ged in two transcriptional units: atpB/E and atpI/H/F/A. We have recen
tly reported that besides containing four -10 and -35 consensus-type (
CT) promoters, the atpB/E operon also contains a non-consensus type (N
CII) promoter that alone is responsible for its expression in non-phot
osynthetic plastids. As the functionality of ATP synthase requires exp
ression of all nine subunits, NCII promoter-driven transcription of th
e atpI/H/F/A operon is to be expected in non-photosynthetic plastids.
Therefore, a detailed transcriptional analysis of this operon was carr
ied out using RNA samples from tobacco leaf, cultured cells (BY-2) and
seedlings grown on streptomycin and spectinomycin; which contain chlo
roplasts, translationally active non-photosynthetic plastids and trans
lationally inactive plastids, respectively. We identified a total of t
hree transcription initiation sites (TIS) and four transcript processi
ng sites in the noncoding regions of this operon. Our results also dem
onstrate that rps2 is co-transcribed with the atpI/H/F/A genes. One of
the TIS (-208 atpI) is characterized by an NCII type promoter, while
other two primary transcripts (-131 atpI and -384 atpH) initiate from
CT promoters. In non-photosynthetic plastids the atpI/H/F/A-specific t
ranscript pool seems to be solely contributed by initiation at the -20
8 atpI (NCII type) promoter, because transcripts from CT promoters do
not accumulate in these plastid types.