A. Svatos et Ab. Attygalle, CHARACTERIZATION OF VINYL-SUBSTITUTED, CARBON-CARBON DOUBLE-BONDS BY GC FT-IR ANALYSIS/, Analytical chemistry, 69(10), 1997, pp. 1827-1836
Vapor-phase infrared spectra allow the determination of the stereochem
istry of carbon-carbon double bonds conjugated with a vinyl group, Cis
and trans isomers of unsubstituted 1,3-alkadienes can be differentiat
ed on the basis of the differences observed in the 900-1000 cm(-1) reg
ion (spectra of cis isomers show two bands at 993 and 906 cm(-1), whil
e those of trans compounds show three absorptions at 998, 949, and 902
cm(-1)) and the 1590-1650 cm(-1) region (the C=C stretch bands are ob
served at 1595 and 1642 cm(-1) for cis compounds and at 1604 and 1650
cm(-1) for trans compounds), Compounds bearing CH2=CHC(CH3)=CHCH2- and
CH2=CHC(=CH2)-CH2- structural moieties, referred to as alpha- and bet
a-type compounds, are frequently encountered as natural products, For
compounds bearing alpha-type groups, the cis/trans configuration of th
e trisubstituted double bond can be determined unambiguously. An absor
ption at 3095-3091 cm(-1), for the =CH2 stretch vibration, is common t
o both of these groups; however, due to the presence of two =CH2 group
s; the relative intensity of the band is much higher for beta-type com
pounds, For alpha-type compounds, a cis configuration at the C-3 carbo
n atom is characterized by a =CH2 wag absorption at 907-906 cm(-1), Fo
r beta-type compounds and 3E-alpha-type compounds, this band appears a
t 899-897 cm(-1). In addition, a wavy ''fingerprint'' pattern with two
minima at 1632 (low intensity) and 1595-1594 cm(-1) (high intensity)
is characteristic for beta-type compounds, Our generalizations are bas
ed on spectra of cis and trans ocimene, myrcene, and dehydration produ
cts of many 3-methyl-1-alken-3-ols. Six isomers of farnesene can be ch
aracterized by GC/FT-IR Furthermore, gas-phase IR allows the determina
tion of the configuration of the trisubstituted double bond at C-3 in
alpha-type farnesene congeners, For example, the homo- and bishomofarn
esene isomers from Myrmica ants were shown to include a 3Z bond.