Biotinidase cleaves biotin from biocytin, thereby recycling the vitami
n. We have determined the structure of the human biotinidase gene. A g
enomic clone, containing three exons that code for the mature enzyme,
was obtained by screening a human genomic bacteriophage library with t
he biotinidase cDNA by plaque hybridization. To obtain a clone contain
ing the most 5' exon of the biotinidase cDNA, a human PAC library by P
CR was screened. The human biotinidase gene is organized into four exo
ns and spans at least 23 kb. The 5'-flanking region of exon 1 contains
a CCAAT element, three initiator sequences, an octamer sequence, thre
e methylation consensus sites, two GC boxes, and one HNF-5 site, but h
as no TATA element. The region from nt -600 to +400 has features of a
CpG island and resembles a housekeeping gene promoter. The structure a
nd sequence of this gene are useful for identifying and characterizing
mutations that cause biotinidase deficiency.