CLASSIFICATION OF NEW PHYTOPLASMAS ASSOCIATED WITH DISEASES OF STRAWBERRY IN FLORIDA, BASED ON ANALYSIS OF 16S RIBOSOMAL-RNA AND RIBOSOMAL-PROTEIN GENE OPERON SEQUENCES

Citation
R. Jomantiene et al., CLASSIFICATION OF NEW PHYTOPLASMAS ASSOCIATED WITH DISEASES OF STRAWBERRY IN FLORIDA, BASED ON ANALYSIS OF 16S RIBOSOMAL-RNA AND RIBOSOMAL-PROTEIN GENE OPERON SEQUENCES, International journal of systematic bacteriology, 48(1), 1998, pp. 269-277
Citations number
18
Categorie Soggetti
Microbiology
ISSN journal
00207713
Volume
48
Issue
1
Year of publication
1998
Pages
269 - 277
Database
ISI
SICI code
0020-7713(1998)48:1<269:CONPAW>2.0.ZU;2-0
Abstract
Strawberry plants exhibiting symptoms of stunting and abnormally small leaves were observed in production fields in central Florida, USA. Si nce the symptoms were suggestive of phytoplasma infection, plants were assayed for presence of phytoplasma by PCR amplification of 16S rDNA and ribosomal protein (rp) gene sequences, Amplification of phytoplasm a-specific DNA sequences by PCR indicated infection of the diseased st rawberry plants by phytoplasmas, RFLP analyses of amplified 16S rDNA r evealed that the plants were infected by two mutually distinct phytopl asmas that differed from strawberry green petal phytoplasma (group 16S rl-C). Both phytoplasmas were members of 16S rRNA gene group I (16Srl) , Based on RFLP analysis of amplified 16S rDNA and rp gene sequences, one was classified in group 16Srl subgroup I and new rp subgroup 16Srl -l(rp); its 16S rRNA-rp subgroup was designated 16Srl-K(rr-rp). The se cond phytoplasma represented a previously undescribed subgroup, design ated K, in 16S rRNA group I but belonged to rp subgroup 16Srl-J(rp); t his phytoplasma's 16S rRNA-rp subgroup was designated 16Srl-J(rr-rp). Results of RFLP analyses agreed with putative restriction site maps ba sed on nucleotide sequences determined for the amplified 16S rDNAs and rp gene operon DNAs. Further evidence indicated that the 16Srl-K(rr-r p) strawberry phytoplasma, Mexican periwinkle virescence phytoplasma a nd stolbur phytoplasma shared sequence homologies that enabled amplifi cation of DNA from all three by PCR using primers previously designed as stolburspecific.