Truncated BPTI missing residues 1 and 2 is investigated together with
variants thereof (Lys-15, Arg-17, and Arg-42 are replaced by other res
idues in various combinations). A comparison of the X-ray structure of
BPTI with that of 3-58BPTI(K15R,R17A,R42S) shows only minor variation
s for the backbone, but the lack of salt bridge between the terminals
and the lack of two N-terminal residues provide a structure open at on
e end. Comparisons of amide exchange rates show a dramatic increase fo
r the most slowly exchanging NH protons of 3-58BPTI and the analogues
thereof, as compared to those of the wildtype despite only small diffe
rences in the structures, The amide exchange rates for truncated analo
gues increase with decreasing TTEP (temperature top endothermic peak)
values. On the basis of the known structural changes comparisons to C-
13 chemical shifts are made. C-13 chemical shifts are assigned using t
he D-isotope and HMBC techniques. Excellent resolution is obtained in
these 1D natural abundance spectra. C-13 NMR chemical shifts are shown
to be able to gauge structural changes. A comparison of C-13 chemical
shifts of WT BPTI (aprotinin) and 3-58BPTI reveals effects caused by
(i) the removal of the salt bridge of the terminii, (ii) the charge of
the N-terminus, and (iii) the increased mobility of the side chain of
Tyr-23, Small effects are also seen due to a conformational change of
the aromatic ring of Phe-4. Ring current shifts at C-13 chemical shif
ts are calculated. The difference in the calculated ring current effec
ts are small comparing the wild-type with 3-58BPTI(K15R,R17A,R42S) pro
vided the structures are relaxed. Protein unfolding as a function of p
H and temperature is studied by DSC. Unfolding occurs at lower tempera
ture with N-terminally truncated analogues, and the maximum is shifted
toward higher pH.