INFLUENCE OF DFT-CALCULATED ELECTRON CORRELATION ON ENERGIES AND GEOMETRIES OF RETINALS AND OF RETINAL DERIVATIVES RELATED TO THE BACTERIORHODOPSIN AND RHODOPSIN CHROMOPHORES
F. Terstegen et V. Buss, INFLUENCE OF DFT-CALCULATED ELECTRON CORRELATION ON ENERGIES AND GEOMETRIES OF RETINALS AND OF RETINAL DERIVATIVES RELATED TO THE BACTERIORHODOPSIN AND RHODOPSIN CHROMOPHORES, Journal of molecular structure. Theochem, 430, 1998, pp. 209-218
DFT-calculations were performed on retinal in the all-trans, 1, 11-cis
-12-s-cis, 2, and 11-cis-12-s-trans configuration, 3, and on the corre
sponding N-methyl Schiff base and protonated N-methyl Schiff base deri
vatives; for the latter, the corresponding 6-s-trans conformations and
the 6-s-trans-13-cis-14-s-trans isomer which play a role in the bacte
riorhodopsin photocycle were also studied. All geometries were fully o
ptimized using the Becke- three-parameter Lee-Yang-Parr method in conj
unction with the 6-31G* basis set (E3LYP/6-31G**). The stabilities in
order of increasing energy are 1, 3 and 2 regardless of the type of s
ubstitution of the end group. While the energy of 3 relative to 1 is a
lmost constant (5 +/- 0.2 kcal mol(-1)), the relative energy of 2 depe
nds somewhat on the nature of the functional group: it is highest in t
he protonated Schiff base derivative 2-SBH + with its steric congestio
n along the C12-C13 bond. Comparison with results previously obtained
on the basis of RHF/6-31G* ab initio calculations reveals that the B3
LYP method is more biased towards pi-electron delocalization. This is
indicated by the reduced degree of double bond fixation along the chro
mophore and also in the increased tendency towards planarization as ma
nifest, e.g. by the change of the C5-C6-C7-C8 dihedral angle between t
he cyclohexene ring and the open chain double bond system. (C) 1998 El
sevier Science B.V.