The voluntary or accidental spread of xenobiotic compounds or heavy me
tals may have subsequent unwanted effects on non-target organisms. In
this way, all soil micro-organisms are indirectly exposed to repeated
pesticide treatments, to sewage sludge landspreading and to accidental
leaching. Assessment of micropollutant impacts requires either the gl
obal description of their effects on the total soil microflora, or the
study of the behaviour of some bioindicator groups. The global descri
ption is generally based on the measurements of soil biomass and its t
urnover, the enumeration of the cultivable microflora, or the determin
ation of soil microbial activities. Other methods aim to describe and
characterise the evolution of the phenotypical (Biolog fingerprints, p
hospholipid fatty acid composition of soil communities) or genotypical
biodiversity (diversity of soil DNA or 16S rRNA genes). Finally, bioi
ndicators tan be used to assess the of micropollutants. Functional mic
robial groups (groups involved in a specific activity of agronomic rel
evance) or specific groups (a given microbial species which tan be det
ected in soil or cultivated on selective media) can constitute potenti
al bioindicators. However to be meaningful, such indicators must be se
nsitive and present reproducible results in various environmental cond
itions.