J. Cruzreyes et al., TRYPANOSOMA-BRUCEI RNA EDITING - ADENOSINE NUCLEOTIDES INVERSELY AFFECT U-DELETION AND U-INSERTION REACTIONS AT MESSENGER-RNA CLEAVAGE, MOLECULAR CELL, 1(3), 1998, pp. 401-409
In the currently envisioned mechanism of trypanosome mitochondrial RNA
editing, U-insertion and U-deletion cycles begin with a common kind o
f gRNA-directed cleavage. However, natural, altered, and mutationally
interconverted editing sites reveal that U-deletional cleavage is inef
ficient without and activated by ATP and ADP, while U-insertional clea
vage shows completely reverse nucleotide effects. The adenosine nucleo
tides' effects appear to be allosteric and determined solely by sequen
ces immediately adjacent to the anchor duplex. Both U-deletional and U
-insertional cleavages are reasonably active at physiological mitochon
drial ATP concentration. Notably, ATP and ADP markedly stimulate compl
ete U-deletion and inhibit U-insertion reactions, reflecting their eff
ects on cleavage. These plus previous results suggest that U deletion
and U insertion are remarkably distinct.