Chromosome terminal, complex repeats in the dipteran Chironomus pallid
ivittatus show rapid concerted evolution during which there is remarka
bly efficient homogenization of the repeat units within and between ch
romosome ends. It has been shown previously that gene conversion is li
kely to be an important component during these changes. The sequence e
volution could be a result of different processes-exchanges between re
peats in the tandem array as well as information transfer between unit
s in different chromosomes-and is therefore difficult to analyze in de
tail. In this study the concerted evolution of a region present only o
nce per chromosome, at the junction between the telomeric complex repe
ats and the subtelomeric DNA was therefore investigated in the two sib
ling species C. pallidivittatus and C. tentans. Material from individu
al microdissected chromosome ends was used, as well as clones from bul
k genomic DNA. On the telomeric side of the border pronounced species-
specific sequence differences were observed, the patterns being simila
r for clones of different origin within each species. Mutations had be
en transmitted efficiently between chromosomes also when adjoining, mo
re distally localized DNA showed great differences in sequence, sugges
ting that gene conversion had taken place. The evolving telomeric regi
on bordered proximally to subtelomeric DNA with high evolutionary cons
tancy. More proximally localized, subtelomeric DNA evolved more rapidl
y and showed heterogeneity between species and chromosomes.