P. Paddison et al., THE ROLES OF THE BACTERIOPHAGE-T4 R-GENES IN LYSIS INHIBITION AND FINE-STRUCTURE GENETICS - A NEW PERSPECTIVE, Genetics, 148(4), 1998, pp. 1539-1550
Seldom has the study of a set of genes contributed more to our underst
anding of molecular genetics than has the characterization of the rapi
d-lysis genes of bacteriophage T4. For example, T4 rII mutants were us
ed to define gene structure and mutagen effects at the molecular level
and to help unravel the genetic code. The large-plaque morphology of
these mutants reflects a block in expressing lysis inhibition (LIN), t
he ability to delay lysis for several hours in response to sensing ext
ernal related phages attacking the cell, which is a unique and highly
adaptive attribute of the T-l family of phages. However, surprisingly
little is known about the mechanism of LIN, or how the various r genes
affect its expression. Here, we review the extensive old literature a
bout the r genes and the lysis process and try to sort out the major p
layers affecting lysis inhibition. We confirm that superinfection can
induce lysis inhibition even while infected cells are lysing, suggesti
ng that the signal response is virtually instantaneous and thus probab
ly the result of post-translational regulation. We identify the rI gen
e as ORF tk.-2, based on sequence analysis of canonical rI mutants. Th
e rI gene encodes a peptide of 97 amino acids (M-r = 11.1 KD; pI = 4.8
) that probably is secreted into the periplasmic space. This gene is w
idely conserved among T-even phage. We then present a model for LIN, p
ostulating that rI is largely responsible for regulating the gpt holin
protein in response to superinfection. The evidence suggests that the
rIIA and B genes are not directly involved in lysis inhibition; rathe
r, when they are absent, an alternate pathway for lysis develops which
depends on the presence of genes from any of several possible prophag
es and is not sensitive to lysis inhibition.