SMART REGION DEFINITION - A NEW WAY TO IMPROVE THE PREDICTIVE ABILITYAND INTERPRETABILITY OF 3-DIMENSIONAL QUANTITATIVE STRUCTURE-ACTIVITY-RELATIONSHIPS
M. Pastor et al., SMART REGION DEFINITION - A NEW WAY TO IMPROVE THE PREDICTIVE ABILITYAND INTERPRETABILITY OF 3-DIMENSIONAL QUANTITATIVE STRUCTURE-ACTIVITY-RELATIONSHIPS, Journal of medicinal chemistry, 40(10), 1997, pp. 1455-1464
This report describes a new methodology aimed at grouping 3D-QSAR inte
raction energy descriptors into regions of neighbor variables bearing
the same chemical and statistical information. These regions represent
the structural variability of the series better than individual descr
iptor variables and can advantageously replace them in the chemometric
analysis. The algorithm used to generate such regions is described, t
ogether with their application for improving the quality of GOLPE vari
able selection. The method is illustrated on a series of 47 glucose an
alogues, inhibitors of glycogen phosphorylase b, and is shown to impro
ve both the predictive ability and the interpretability of the 3D-QSAR
models obtained, comparing favorably with other methods previously de
scribed.