Gene targeting in mice was used to investigate the unknown function of
Scp2, encoding sterol carrier protein-2 (SCP2; a peroxisomal lipid ca
rrier) and sterol carrier protein-x (SCPx; a fusion protein between SC
P2 and a peroxisomal thiolase). Complete deficiency of SCP2 and SCPx w
as associated with marked alterations in gene expression, peroxisome p
roliferation, hypolipidemia, impaired. body weight control, and neurop
athy. Along with these abnormalities, catabolism of methyl-branched fa
tty acyl CoAs was impaired. The defect became evident from up to 10-fo
ld accumulation of the tetramethyl-branched fatty acid phytanic acid i
n Scp2(-/-) mice. Further characterization supported that the gene dis
ruption led to inefficient import of phytanoyl-CoA into peroxisomes an
d to defective thiolytic cleavage of 3-ketopristanoyl-CoA. These resul
ts corresponded to high-affinity binding of phytanoyl-CoA to the recom
binant rat SCP2 protein, as well as high 3-ketopristanoyl-CoA thiolase
activity of the recombinant rat SCPx protein.