The RFLPs detected by the AvaII, BamHI, EcoRV, KpnI, HaeIII, and RsaI
restriction enzymes in the D-loop region of mitochondrial DNA of the N
orthern Selkups were analyzed. Frequencies of the rare variants were e
stimated for all polymorphic sites examined. A total of 16 mitotypes w
ere described. Results were compared with the literature data on mitoc
hondrial DNA polymorphism in Caucasoid and Mongoloid populations. High
frequency of the KpnI bp 16129 site loss (28.14%) together with a rem
arkably reduced number of mitotypes in the group of variants with the
frequency of 2% compared to the Russians and Mongols, was considered t
o be the most informative population feature of the Northern Selkups.
All variants found in the Selkups, occurred more frequently in the Mon
gols than in Russians. Four out of ten rare variants (frequency <2%) o
bserved in the Selkups were detected in Mongols and Russians. The freq
uency of three of these variants was higher in the Russian population.
Six mitotypes were characterized as Selkup-specific. These observatio
ns suggest a considerable reduction of mitochondrial gene pool diversi
ty in Northern Selkups compared to larger ethnic groups of Mongoloids
and Caucasoids. The structure of mitochondrial genome in Selkups is de
fined by the presence of the major Mongoloid and minor Caucasoid compo
nents, which suggests complex ethnogeny of the contemporary Selkup pop
ulation.