Where, when and how does V-H diversification occur in the rabbit? Earl
y diversification by gene-conversion and somatic hypermutation in rabb
it appendix and chicken bursa of Fabricius are similar processes; the
chicken bursa and the rabbit appendix have homologous functions. Howev
er, diversification in bursa starts during embryonic development where
as it starts in rabbit appendix about 2 weeks after birth in the prese
nce of antigens and superantigens that may contribute to positive and
negative selection, affect B-cell expansion and mold the repertoire. T
he biochemical steps leading to diversification by gene conversion are
unknown. However elevated levels of RAD51 mRNA in both chicken bursa
and young rabbit appendix suggest that repair of double strand breaks
may be involved. The base changes found in expressed rabbit V-H sequen
ces derived from rearrangement of known germline V-H genes followed by
one or more gene conversions occur with frequencies similar to those
found in analyses of somatic hypermutation. The Ser codons in CDR1 and
CDR2 of rabbit V(H)1 genes are all AGY rather than TCN, suggesting th
at they may represent intrinsic hotspots for hypermutation comparable
to those described in human and mouse V-H. Somatic hypermutation may f
urther refine antibody affinities in rabbit germinal centers.