Da. Pelletier et Cs. Harwood, 2-KETOCYCLOHEXANECARBOXYL COENZYME-A HYDROLASE, THE RING-CLEAVAGE ENZYME REQUIRED FOR ANAEROBIC BENZOATE DEGRADATION BY RHODOPSEUDOMONAS-PALUSTRIS, Journal of bacteriology, 180(9), 1998, pp. 2330-2336
2-Ketocyclohexanecarboxyl coenzyme A (3-ketochc-CoA) hydrolase has bee
n proposed to catalyze an unusual hydrolytic ring cleavage reaction as
the last unique step in the pathway of anaerobic benzoate degradation
by bacteria. This enzyme was purified from the phototrophic bacterium
Rhodopseudomonas palustris by sequential Q-Sepharose, phenyl-Sepharos
e, gel filtration, and hydroxyapatite chromatography. The sequence of
the 25 N-terminal amino acids of the purified hydrolase was identical
to the deduced amino acid sequence of the badI gene, which is located
in a cluster of genes involved in anaerobic degradation of aromatic ac
ids. The deduced amino acid sequence of badI indicates that 2-ketoche-
CoA hydrolase is a member of the crotonase superfamily of proteins. Pu
rified BadI had a molecular mass of 35 kDa as determined by sodium dod
ecyl sulfate-polyacrylamide gel electrophoresis and a native molecular
mass of 35 kDa as determined by gel filtration. This indicates that t
he native form of the enzyme is a homotetramer. The purified enzyme wa
s insensitive to oxygen and catalyzed the hydration of 2-ketoche-CoA t
o yield pimelyl-CoA with a specific activity of 9.7 mu mol min-L mg of
protein(-1). Immunoblot analysis using polyclonal antiserum raised ag
ainst the purified hydrolase showed that the synthesis of BadI is indu
ced by growth on benzoate and other proposed benzoate pathway intermed
iates but not by growth on pimelate or succinate. An R. palustris muta
nt, carrying a chromosomal disruption of badI, did not grow with benzo
ate and other proposed benzoate pathway intermediates but had wild-typ
e doubling times on pimelate and succinate, These data demonstrate tha
t BadI, the 2-ketoche-CoA hydrolase, is essential for anaerobic benzoa
te metabolism by R. palustris.