UP-PCR GENOTYPING AND RDNA ANALYSIS OF ASCOCHYTA-PISI LIB

Citation
Ps. Lubeck et al., UP-PCR GENOTYPING AND RDNA ANALYSIS OF ASCOCHYTA-PISI LIB, Journal of phytopathology, 146(1), 1998, pp. 51-55
Citations number
26
Categorie Soggetti
Plant Sciences
Journal title
ISSN journal
09311785
Volume
146
Issue
1
Year of publication
1998
Pages
51 - 55
Database
ISI
SICI code
0931-1785(1998)146:1<51:UGARAO>2.0.ZU;2-3
Abstract
Isolates of Ascochyta pisi, previously identified as separate pathotyp es, were genotyped by rDNA-RFLP and UP-PCR using 8 UP-primers and 2 ar bitrary primers individually or in pair-wise combinations. The appeara nce of polymorphic UP-PCR products for all studied isolates facilitate d their differentiation. The markers were suitable in identifying isol ates, and may be useful for developing isolate-or pathotype-specific P CR-based diagnostic assays. In studying genetic relatedness by UP-PCR among A, pisi isolates, two distinct clusters were revealed. rDNA anal ysis of the isolates based on endonuclease digestion of amplified ITS1 and ITS2-25S nuclear rDNA regions did not separate the isolates, wher eas the variability of the isolates using UP-PCR was more than 40%.