Linear free energy relationships (LFERs) and extra-thermodynamic relat
ionships (ETRs), i.e., similarity and analogy models of physical organ
ic chemistry, are mathematically and statistically equivalent to the m
odels much used in chemometrics and data analysis, i.e., PCA, PLS, and
SIMCA. Examples of early LFERs and ETRs include the Bronsted, Hammett
, Taft, and Hansch relationships. Much of the early development of che
mometrics derives from this equivalence. Thus, the interpretation and
derivation of LFERs and ETRs as the first terms of serial expansions o
f perturbation theory applied to moderate structural change lead first
to the SIMCA method for classification and discriminant analysis (pat
tern recognition), then to the approach of principal properties for th
e characterization of structural fragments, compounds, and materials,
and finally also strongly influenced the development of PLS and its us
e in structure-effect relationships such as quantitative structure-act
ivity relationships (QSARs).The interpretation of chemical data by a c
ombination of physical organic chemistry models and chemometric princi
ples often leads to interesting conclusions as illustrated by some exa
mples.