The complete DNA sequence of human herpesvirus-7 (HHV-7) strain RK was
determined following direct cloning of virion DNA fragments into a se
quencing vector. The sequence was compared with the previously publish
ed complete sequences of HHV-7 strain JI and human herpesvirus-6 (HHV-
6) strain U1102. Despite a very close relationship between the two HHV
-7 strains, differences are apparent in regions containing tandem reit
erations, particularly in the ''telomeric'' reiterations located near
the termini of the large direct repeat at the genome ends, and in a to
tal of 179 additional positions distributed throughout the genome (i.e
., about one nucleotide difference per kbp). This extent of divergence
implies that the two strains arose from an ancestral virus several th
ousands of years ago. Differences that affect coding potential do not
cluster in particular protein-coding regions, indicating that specific
HHV-7 genes have not been measurably subject to unusual evolutionary
pressures since divergence. Reassessments of genetic content indicated
that the HHV-7 genome contains 84 different genes, whereas the HHV-6
genome contains 85. All HHV-7 genes but 1 have direct HHV-6 counterpar
ts, and all but 2 HHV-6 genes have HHV-7 homologues. Sequence comparis
ons between HHV-7 and HHV-6 provided evidence that the protein-coding
regions of 11 genes are expressed by splicing, (C) 1998 Academic Press
.