The existence of naturally occurring antisense RNAs has been illustrat
ed, in eukaryotes, by an increasing number of reports. The following r
eview presents the major findings in this field, with a special focus
on the regulation of gene expression exerted by endogenous complementa
ry transcripts. A large variety of eukaryotic organisms, contains anti
sense transcripts. Moreover, the great diversity of genetic loci encod
ing overlapping sense and antisense RNAs suggests that such transcript
s may be involved in numerous biological functions, such as control of
development, adaptative response, viral infection. The regulation of
gene expression by endogenous antisense RNAs seems of general importan
ce in eukaryotes as already established in prokaryotes: it is likely t
o be involved in the control of various biological functions and to pl
ay a role in the development of pathological situations. Several exper
imental evidences for coupled, balanced or unbalanced expression of se
nse and antisense RNAs suggest that antisense transcripts may govern t
he expression of their sense counterparts. Furthermore, documented exa
mples indicate that this control may be exerted at many levels of gene
expression (transcription, maturation, transport, stability and trans
lation). This review also addresses the underlying molecular mechanism
s of antisense regulation and presents the current mechanistic hypothe
ses. (C) 1998 Elsevier Science B.V. All rights reserved.