Isogenes are highly homologous to each other and are often difficult t
o ascertain, as has been the case with metallothionein, a metal-bindin
g protein rich in cysteines. Conventional separation of metallothionei
n isoforms relied on ion exchange chromatography of the proteins, or s
creening for the sequences from gene libraries. In this study, a combi
nation of RT-PCR and partial protein sequencing is used in the identif
ication of metallothionein isogenes expressed in porcine liver. By thi
s approach, we have identified expressed coding sequences which consti
tute 10 new isogenes. Of the four known groups of metallothioneins (MT
), phylogenetic analyses place these pig isogenes in the MT-1 group, e
xcept two which are identified as being closely related to MT-2, and n
one in groups 3 and 4. The isogenes are thus named pMT-1a to -1g, and
pMT-2a and -2b. While each of the isogene sequences is unique, two iso
genes, pMT-1e1 and pMT-1e2, share an identical amino acid sequence, di
ffering only in specific codons. Two others, pMT-1b and pMT-1g, have a
cysteine substituted by arginine, the first such sequence ever detect
ed in MT.pMT-2a and pMT-2b are closely aligned with the MT-2 group of
vertebrates, in spite of the absence of a characteristic acidic amino
acid at position 10 or 11, common in other mammalian metallothioneins.
(C) 1998 Elsevier Science B.V. All rights reserved.