Isolation and characterization of four different insertion sequence (I
S) elements from Pseudomonas glumae MAFF 302744 through transposition
into the entrapment vector pSH1063 are described. One of the elements,
IS1416, was further characterized. IS1416 is 1322 bp long and carries
29-bp terminal inverted repeats flanked by a 3-bp direct duplication.
IS1416 contains three open reading frames (ORFs), which are designate
d ORFA1, ORFA2, and ORFB, on one strand. Both DNA sequence of IS1416 a
nd the deduced amino acid sequences of its ORFs strongly suggest that
IS1416 is a member of the IS3 family. and is closely related to IS401
from Pseudomonas cepacia and IS51 from Pseudomonas syringae. To our kn
owledge, IS1416 is the first IS element isolated from P. glumae. The g
ene organization and possible regulation of transposition functions of
IS1416 are also discussed. (C) 1998 Academic Press.