S. Bounaga et al., THE MECHANISM OF CATALYSIS AND THE INHIBITION OF THE BACILLUS-CEREUS ZINC-DEPENDENT BETA-LACTAMASE, Biochemical journal, 331, 1998, pp. 703-711
The plot of k(cat)/K-m against pH for the Bacillus cereus 569/H beta-l
actamase class B catalysed hydrolysis of benzylpenicillin and cephalos
porin indicates that there are three catalytically important groups, t
wo of pK(a) 5.6 +/- 0.2 and one of pK(a) 9.5 +/- 0.2. Below pH 5 there
is an inverse second-order dependence of reactivity upon hydrogen ion
concentration, indicative of the requirement of two basic residues fo
r catalysis. These are assigned to zinc(II)-bound water and Asp-90, bo
th with a pK(a) of 5.6 +/- 0.2. A thiol, N-(2'-mercaptoethyl)-2-phenyl
acetamide, is an inhibitor of the class B enzyme with a K-i of 70 mu M
. The pH-dependence of K-i shows similar pH inflections to those obser
ved in the catalysed hydrolysis of substrates. The pH independence of
K-i between pH 6 and 9 indicates that the pK(a) of zinc(II)-bound wate
r must be 5.6 and not the higher pK(a) of 9.5. The kinetic solvent iso
tope effect on k(cat)/K-m is 1.3 +/- 0.5 and that on k(cat) is 1.5. Th
ere is no effect on reactivity by either added zinc(II) or methanol. T
he possible mechanisms of action for the class B beta-lactamase are di
scussed, and it is concluded that zinc(II) acts as a Lewis acid to sta
bilize the dianionic form of the tetrahedral intermediate and to provi
de a hydroxide-ion bound nucleophile, whereas the carboxylate anion of
Asp-90 acts as a general base to form the dianion and also, presumabl
y, as a general acid catalyst facilitating C-N bond fission.