REFINEMENT OF THE 3-DIMENSIONAL STRUCTURES OF CYTOCHROME C(3), FROM DESULFOVIBRIO-VULGARIS HILDENBOROUGH AT 1.67 ANGSTROM RESOLUTION AND FROM DESULFOVIBRIO-DESULFURICANS ATCC-27774 AT 1.6 ANGSTROM RESOLUTION
P. Simoes et al., REFINEMENT OF THE 3-DIMENSIONAL STRUCTURES OF CYTOCHROME C(3), FROM DESULFOVIBRIO-VULGARIS HILDENBOROUGH AT 1.67 ANGSTROM RESOLUTION AND FROM DESULFOVIBRIO-DESULFURICANS ATCC-27774 AT 1.6 ANGSTROM RESOLUTION, Inorganica Chimica Acta, 273(1-2), 1998, pp. 213-224
The three-dimensional X-ray structures of cytochrome c(3) from Desulfo
vibrio vulgaris Hildenborough and from Desulfovibrio desulfuricans ATC
C 27774 were previously determined at 1.9 and 1.75 Angstrom resolution
, respectively. More recently, higher resolution data were collected (
at 1.67 and 1.6 Angstrom respectively) using synchrotron radiation, Th
e refinement of the previously determined three-dimensional structures
using the new data resulted in more accurate structural models, with
no significant changes of the initial structures. In cytochrome c(3) f
rom D. vulgaris Hildenborough, the R-factor was lowered from 19.6 to 1
5.3% using SHELXL-93, complemented with inspection and correction of t
he model relative to the electron density. This cytochrome crystallise
s in space group P6(1) with a=77.3, b=77.3, c=77.1 Angstrom, Z=12. Cyt
ochrome c(3) from D. desulfuricans ATCC 27774 crystallises in space gr
oup P6(1)22 with a=62.71, b=62.71, c=111.09 Angstrom, Z=12. The R-fact
or was lowered from 17.8 to 16.6% using the same refinement procedure,
In this cytochrome the 71-74 loop region was rearranged with no evide
nce of the previously found disorder, and disorder models were introdu
ced in the terminal regions of residues serine 84 and lysine 90. The r
esulting higher-resolution structural models for both cytochromes are
analyzed and compared with those previously obtained. (C) 1998 Elsevie
r Science S.A. All rights reserved.