An aspartic proteinase was purified from the seeds of Arabidopsis thal
iana (ecotype RLD) using affinity chromatography on pepstatin-agarose
and ion exchange chromatography. The purified enzyme is optimally acti
ve at pH 3.5 and completely inhibited by pepstatin A. The purified Ara
bidopsis aspartic proteinase contains four subunits (apparent molecula
r weights 31, 28.5, 15 and 6 kDa), two of which are probably linked by
disulfide bridges. These properties are similar to the aspartic prote
inase previously isolated from barley seeds. The amino acid sequence o
f the peptide subunits corresponds exactly with the sequence of the pr
eviously isolated cDNA for the Arabidopsis aspartic proteinase. The Ar
abidopsis enzyme processed probarley lectin in vitro at the carboxy-te
rminus between phenylalanine and alanine, the same place where the bar
ley enzyme cleaves the lectin in vitro. The aspartic proteinase appear
s to be the major enzyme processing the lectin in seeds as pepstatin A
inhibited this activity in a crude seed extract. (C) 1998 Elsevier Sc
ience Ltd. All rights reserved.