Olfactomedin is a secreted polymeric glycoprotein of unknown function,
originally discovered at the mucociliary surface of the amphibian olf
actory neuroepithelium and subsequently found throughout the mammalian
brain. As a first step toward elucidating the function of olfactomedi
n, its phylogenetic history was examined to identify conserved structu
ral motifs. Such conserved motifs may have functional significance and
provide targets for future mutagenesis studies aimed at establishing
the function of this protein. Previous studies revealed 33% amino acid
sequence identity between rat and frog olfactomedins in their carboxy
l terminal segments. Further analysis, however, reveals mole extensive
homologies throughout the molecule. Despite significant sequence dive
rgence, cysteines essential for homopolymer formation such as the CXC
motif near the amino terminus are conserved, as is the characteristic
glycosylation pattern, suggesting that these posttranslational modific
ations are essential for function. Furthermore, evolutionary analysis
of a region of 53 amino acids of fish, frog, rat, mouse, and human olf
actomedins indicates that an ancestral olfactomedin gene arose before
the evolution of terrestrial vertebrates and evolved independently in
teleost, amphibian, and mammalian lineages. Indeed, a distant olfactom
edin homolog was identified in Caenorhabditis elegans. Although the am
ino acid sequence of this invertebrate protein is longer and highly di
vergent compared with its vertebrate homologs, the protein from C. ele
gans shows remarkable similarities in terms of conserved motifs and po
sttranslational modification sites. Six universally conserved motifs w
ere identified, and five of these are clustered in the carboxyl termin
al half of the protein. Sequence comparisons indicate that evolution o
f the N-terminal half of the molecule involved extensive insertions an
d deletions; the C-terminal segment evolved mostly through point mutat
ions, at least during vertebrate evolution. The widespread occurrence
of olfactomedin among vertebrates and invertebrates underscores the no
tion that this protein has a function of universal importance. Further
more, extensive modification of its N-terminal half and the acquisitio
n of a C-terminal SDEL endoplasmic-reticulum-targeting sequence may ha
ve enabled olfactomedin to adopt new functions in the mammalian centra
l nervous system.