A proposal for a standard CORBA interface for genome maps

Citation
E. Barillot et al., A proposal for a standard CORBA interface for genome maps, BIOINFORMAT, 15(2), 1999, pp. 157-169
Citations number
32
Categorie Soggetti
Multidisciplinary
Journal title
BIOINFORMATICS
ISSN journal
13674803 → ACNP
Volume
15
Issue
2
Year of publication
1999
Pages
157 - 169
Database
ISI
SICI code
1367-4803(199902)15:2<157:APFASC>2.0.ZU;2-4
Abstract
Motivation:The scientific community urgently needs to standardize the excha nge of biological data. This is helped by the use of a common protocol and the definition of shared data structures. We have based our standardization work on CORBA, a technology, that has become a standard in the past years and allows interoperability between distributed objects. Results: We have defined an IDL specification for genome maps and present i t to the scientific community We have implemented CORBA sewers based on thi s IDL to distribute RHdb and HuGeMap maps. The IDL will co-evolve with the needs of the mapping community.