The binding of TCRs to their peptide-MHC ligands is characterized by a low
affinity, slow kinetics, and a high degree of cross-reactivity, Here, we re
port the results of a kinetic and thermodynamic analysis of two TCRs bindin
g to their peptide-MHC ligands, which reveal two striking features. First,
significant activation energy barriers must be overcome during both associa
tion and dissociation, suggesting that conformational adjustments are requi
red. Second, the low affinity of binding is a consequence of highly unfavor
able entropic effects, indicative of a substantial reduction in disorder up
on binding. This is evidence that the TCR and/or peptide-MHC have flexible
binding surfaces that are stabilized upon binding. Such conformational flex
ibility, which may also be a feature of primary antibodies, is likely to co
ntribute to cross-reactivity in antigen recognition.